| Acc. |
TCMT46609 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Sphingosine kinase 1 OS=Homo sapiens E-value=3e-42; Sphingosine kinase A OS=Dictyostelium discoideum E-value=1e-39; Sphingosine kinase 2 OS=Homo sapiens E-value=7e-39; Sphingosine kinase 1 OS=Rattus norvegicus E-value=1e-38; Sphingosine kinase 1 OS=Mus musculus E-value=2e-38; |
| Length |
1988 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_SROOT_KV0 (4 ESTs); MT_ECELL (4 ESTs); MT_KVKC (2 ESTs); MTUS_MIXTISSUE (2 ESTs); MT_INSECT (2 ESTs); MT_JCVI-MT2 (2 ESTs); MT_DLEAF (1 ESTs); MT_GPOD (1 ESTs); MT_DSIL (1 ESTs); MT_PhoLEAF (1 ESTs); MT_Drought (1 ESTs); MT_GSEED (1 ESTs); MT_Shoots (1 ESTs); MHRP-root (1 ESTs); |
| Sequence |
TGGCACGAGGGAAAAAAAAATATAATCAAAATTAGTAAACACATTTCATGTTAATGTTTA
GTGCTTTCTTAGTTTCATTCTCCATCATTGTGAAAACCATATTCTATAATCTATATAGTA
TAGTATTAATAATTATTTATAATTTGTAATCGTAATTATCTCCGAGACGTGAAAACCGGA
TTTCATTTACTGAACCGGGTTTCCGGCTGAGATTGGTGGGGTCCACTTTCCGGAGATGGA
TCGTCCTTTATTTTCGGACCGAGTAACCGTCAACGGCACGGTAACGCCGTTAGCTCTTCT
CACCGACGGAAGGCTATGGTGGTCGGAAGGAATTCAACGGTGTCTCTCCGTTGAAAAAGA
GGTTCTCGGATTCGTCTCTAGTGGTTCATACATCAAACTCAAGACTCTTGTGGAAGCTCG
TGACGGTTGTTGCACCACCGGTGAAGCTGGCAGACTCGTTCGTAACGACGTCGTTTTTAA
ACCCTCGTCGGAGGAAAATCTTAGGCTTTGGTGTCTGAAGCTTCATGAATTCATTGATTC
TCTTGGTCGACCGAAGAAATTGCTTGTTTTTGTGAATCCATTTGGTGGGAAGAAATGTGC
TGTCAAGATTTTTGCTGAACAAGTGAAACCTCTTTTTGATGATGCTCAAATTCAACTCAC
TATACAAGAAACTAAACATCAGCTACATGCCAAAGAGGTTGCTCGTTCGTTGGATATTTC
AAAGCACGATGGAATTGTTTGTATTAGTGGAGATGGAATTTTGGTTGAGGTTGTAAATGG
GCTTCTTCAAAGAGAGGATTGGGATACAGCAATAAAGACACCCCTTGGAATAGTTCCTGC
AGGTACTGGAAATGGCATGGCAAAATCTCTGCTTGATTCAGTTGGTGATCCTTGCGCAAT
AGCCAATGCCGTTCTTGCCATCATTCGAGGCCATAAGCGACAGCTTGATGTGGCTACCAT
CACACAAGGGGAAACCAGATTTTTCAGTATATTGATGTTGGCATGGGGTCTAATTGCTGA
TATTGACATCGAGTCTGAAAAGTATCGGTGGATGGGAAGTGCTCGTCTAGATTTTTATGC
TGTCTGCCGACTCTTCAATTTGAGGCTATACAATGGATCTGTTTCTTTTGTGCCTGCACC
AGGGTTTGAGTCTTACGGGGAGTCCACTAGTTACCCAGGCAAATCTACTATTAGAGGGAA
CAGTAGCGATCCAAGTGAAGGGGAACATGTTAATTTGCAAACACTTTGTTATCAAGGACC
TGAAATAGACTTGGAAAATATGAATTGGAGAGTTATAAATGGACCCTTTATTAGTGTCTG
GGTTCACAATGTTCCTTGGGGTGCTGAAGACACAATGGCAGCACCTGATGCAAAGTTCTC
CGACGGTTATCTGGACTTGATCATTACGATGAATTGCCCGAAGTTACATTTGTTGTCAAT
GATGTCAGAGCTGAATAAGGGAGGACACGTGAAATCTCCGTATGTCACGTACCTAAAGGT
GAAAGCTTTCAGCTTGGAACCTGGTACACGCACCAAGGACCTAGAGAAGGAAGGGATCAT
AGATTCAGATGGTGAGGTTTTGGCAAGAGGGAGAGGGACCTACAAGTGTGAGCAGAAGGC
TTTGATGGCCTATGATAAATTGCAGATAACAGTGGATAAAGGTTTAGCTACACTTTTTAC
CCCTATGTAATACTCTTGGTTAATTATTTTCTCGGGCACAATCCACACCACGCAATATTG
TACACACACACACACACAATACAAATACATGTTTGTATCAACAGAACCTTCCTGTACAGC
ATCAAATATATTGAATAGCAAGTTTCCTTTGTAACACCAAATTATTGGCGGTTAAATTTT
GAATTATTAATACGGAAATTATATTATCACTCTTTTCTTGAGTTGAGTGAGAGGGTACAC
TTCCAAAGATAAAGTGTAATGAACCATGAAGTTATATACATGTGTATAAACAAACCATGA
AGTTATTG
|
| EST members of Unigene |
CF069022 CA922024 CX541190 CX526175 BG448212 BF647929 BF644964 BF643307 BG589148 BG453596 BI308519 BF518806 BE205001 BE204342 BE204216 BE187507 BI263037 BQ165848 BQ165847 BF636396 BI266966 BF641451 GE349891 GE344862
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Metabolism > Lipid Metabolism > ko00600 Sphingolipid metabolism > K04718 sphingosine kinase;
Environmental Information Processing > Signal Transduction > ko04020 Calcium signaling pathway > K04718 sphingosine kinase;
Environmental Information Processing > Signal Transduction > ko04370 VEGF signaling pathway > K04718 sphingosine kinase |
| EC |
2.7.1.91 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.43265.1.S1_at
|
| Corresponding NCBI Gene |
828239
|
| Trichome-related Gene from Literature |
N/A
|