| Acc. |
TCMT42560 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
36.4 kDa proline-rich protein OS=Solanum lycopersicum E-value=3e-30; Cortical cell-delineating protein OS=Zea mays E-value=5e-14; 14 kDa proline-rich protein DC2.15 OS=Daucus carota E-value=5e-14; Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana E-value=7e-09; |
| Length |
1874 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MHRP-root (10 ESTs); MT_ROOTPHOS (7 ESTs); MtBB_NOD (6 ESTs); MtBA (6 ESTs); MT_NOD_GVN (5 ESTs); MT_ECELL (3 ESTs); GLSD (3 ESTs); MTPOSE (2 ESTs); MT_SROOT_KV0 (2 ESTs); MT_NOD_ROOT (2 ESTs); MT_SROOT_KV1 (2 ESTs); MT_JCVI-MT3 (2 ESTs); MT_CDS (2 ESTs); MT_DSIL (1 ESTs); MT_GSEED (1 ESTs); MT_VILEAF (1 ESTs); MT_GESD (1 ESTs); MT_SEEDROOT_KV3 (1 ESTs); MT_DFLOWER (1 ESTs); MT_NOD_NOLLY (1 ESTs); |
| Sequence |
ATGCAAATAAGAAAAATTATGTCTGGAGTTCTCAAGTTTGTCTACGCTATAATTCTTTTT
CTTTTCTTATTTCTTGTTGCAAGGGAAGTTGGTGGTCTTGAAACTATTGAGTGTGAAACT
GATGGTGATTGTCCAAGATCTATGATCAAGATGTGGAACAAGAATTATCGTCATAAGTGC
ATTGATGGAAAATGTGAATGGATTAAAAAGCTACCTTGATTCTATGAGTAACAGACCAAG
TGGCGTAGATAAAAAATGCCATATACAATAGAACGATTTTTTGTACTAGCAAAATAAATG
TGCAACATACTGTATGATAGAATTTTCCATACAGATGATTCATGAACCTTGCATTTCTGA
CTTGTTTACTCTAAGATGATTCTAAGGAAACAAACTATTATTTATCAAAAAAAAATTCAT
AGTAAACTACACTACTTTCTTTAAAACATGGCTAACTATGCTATAGCCAATGTTTTGATC
CTTCTCTTGAACTTGAGTACCTTACTCAATGTTCTTGCTTGCCCTTATTGTCCTTACCCA
AGCCCTAAACCACCTTCACACCACCCTCCTATTGTTAAGCCACCAGTTCACAAACCACCA
AAGCATTCTCCTACTCCTAAACCACCAGTTCATAAACCACCAAGATATCCTCCTAAACCA
TCACCTTGTCCACCCCCATCATCAACACCAAAACCACCTCATCATCCCAAACCCCCAGCA
GTACACCCACCACATGTTCCAAAACCACATCCACCTTATGTTCCAAAACCACCAATTGTT
AAACCTCCAATAGTACATCCACCTTACGTACCAAAACCCCCAGTTGTGAAACCACCACCA
TATGTCCCTAAACCACCTGTTGTGAGACCACCCTATGTTCCTAAACCACCAGTTGTACCT
GTAACACCACCTTATGTTCCTAAGCCACCAATTGTTTTCCCACCACATGTTCCTCTACCT
CCAGTTGTACCATCACCACCACCTTATGTACCAACACCTCCAATTGTGAAACCACCAATT
GTTTTTCCACCACATGTTCCTCTACCTCCAGTTGTGCCTGTAACACCACCTTATGTGCAA
CCACCACCTATTGTAACTCCACCAACACCAACACCTCCAATTGTGACACCACCAACACCA
CCTAGTGAAACACCTTGTCCTCCACCACCACTTGTACCTTATCCACCACCACCAGCACAA
CAAACATGTTCCATTGATGCTTTGAAGTTGGGTGCATGTGTTGATGTGCTTGGTGGACTC
ATACATATTGGTATAGGTGGAAGTGCTAAACAAACATGTTGTCCATTGCTTCAAGGACTT
GTTGATTTGGATGCTGCTATATGTCTTTGCACCACTATTAGACTTAAACTTCTTAATATC
AATCTTGTTATCCCCCTTGCTCTTCAGGTTCTCATTGATTGTGGCAAAACTCCACCAGAA
GGGTTTAAGTGCCCAGCTTCTTAATCATATATGCACAAAGCTAGTACATTTATATTTTGA
AGGAATTCCATGAATATTAGTTAGCTCGGAATAAGCGTTTACAAGTTGAAAGAGATGTAG
TGAAAAAATTGTCATTGTTTCTCGTTCAAGTTGGTGTAGGGATACCAGAAATGAAGGACA
AGAACGTAGTAGAATTGTACTTTGATGGAAATTATGTAACTGGAAGAAGACCAAAAAAAT
ATTCTGCACTTCACGTAGTAGTCGTCGTCATGCATTAATATGACATAAACTTTCAATTTA
ATTATTTTCTGTTTCTATCTTTTTGTCACTTTCTTTCATTGCGTATGATGCTGTGTGTGT
ATGTCAGCGTTTGTAAGTTCAACCCGTGAGTGCTTTGGGGAAATGTATAATAAGTTCTTT
TTATATTTTCTTCC
|
| EST members of Unigene |
EF414324 Y15372 DY616962 AL380803 AL377073 AL377072 AL376203 AL376202 AL375089 CX538432 BF650544 BF650249 BF647491 BG582371 BG581809 BG581079 BG580296 BG580053 AW685987 AW686104 AW329605 AW329194 AW329020 AW328928 AW328926 AW328921 AW287898 CA991119 BG588897 BG588651 BG588180 BE240397 BE240030 BE239849 BE239732 BE239570 BE239479 BE239460 AW774924 BQ148313 BF521303 AJ499100 AJ498898 BE205198 BE204395 CA989650 BQ122716 BQ122643 CX517635 BF003659 BF003429 AL373411 AL373410 AL373256 AL372446 AL372445 AL368958 EY475853 EY474881
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.8548.1.S1_at
|
| Corresponding NCBI Gene |
5008021
|
| Trichome-related Gene from Literature |
N/A
|