| Acc. |
TCMT42697 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Squalene monooxygenase OS=Panax ginseng E-value=0; Squalene monooxygenase 1,1 OS=Arabidopsis thaliana E-value=0; Squalene monooxygenase 1,2 OS=Arabidopsis thaliana E-value=0; Squalene monooxygenase 1,2 OS=Brassica napus E-value=0; Squalene monooxygenase 1,1 OS=Brassica napus E-value=0; |
| Length |
2155 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MtBA (11 ESTs); MtBB_NOD (6 ESTs); MtSNF (5 ESTs); MT_SEEDROOT_KV3 (4 ESTs); MT_SROOT_KV2 (3 ESTs); MT_SROOT_KV0 (3 ESTs); MT_JAS_ROOR (3 ESTs); MT_INSECT (2 ESTs); MT_DSIL (2 ESTs); MT_CDS (2 ESTs); MT_Shoots (2 ESTs); MT_VILEAF (2 ESTs); MT_SROOT_KV1 (2 ESTs); MT_JCVI-MT3 (1 ESTs); MT_IROOT_DSIR (1 ESTs); MT_PhoLEAF (1 ESTs); MT_ECELL (1 ESTs); MT_JCVI-MT1 (1 ESTs); MT_NOD_ROOT (1 ESTs); MT_HOGA (1 ESTs); MT_DFLOWER (1 ESTs); MT_DLEAF (1 ESTs); |
| Sequence |
CAAAACCCTTCATTTTTCCTCTGCCAACTTGGCAGAGAGAGAGAGAAGAATCTCAAACGC
CAATAACTACACCTAATTCTCCGTCATCACCACTGTCACCATCGCCGGCGAGATTCCTCC
GATATGGATCTATACAATATCGGTTGGATTTTAAGCTCTGTTTTGAGTCTATTTGCGTTA
TACAATTTGATTTTCGCCGGGAAGAAGAATTATGATGTGAATGAGAAGGTAAATCAGCGT
GAGGATAGCGTGACGAGTACTGATGCCGGTGAAATTAAATCGGACAAACTTAACGGTGAT
GCTGATGTTATCATTGTTGGAGCTGGTATTGCTGGTGCTGCTTTGGCTCATACACTTGGG
AAGGATGGACGTCGAGTGCATATTATTGAAAGAGATTTGAGTGAGCCTGACAGAATTGTT
GGAGAGTTGCTACAACCCGGTGGCTATCTCAAATTAGTTGAACTCGGGCTTCAAGATTGT
GTGGACAATATTGATGCACAGCGAGTGTTTGGTTATGCTCTTTTTAAGGACGGGAAACAT
ACTCGTCTCTCTTATCCCTTGGAAAAGTTTCACTCAGATGTCTCTGGCAGAAGCTTTCAC
AATGGGCGTTTTATTCAGAGGATGCGAGAGAAAGCTGCCTCACTTCCCAATGTAAATATG
GAGCAAGGAACAGTCATTTCCCTACTTGAAGAGAAGGGGACAATCAAAGGTGTGCAATAC
AAGAATAAAGATGGTCAGGCATTGACAGCATATGCTCCTCTTACCATTGTTTGTGATGGC
TGTTTCTCAAACTTGCGTCGTTCTCTTTGCAACCCTAAGGTAGATAATCCCTCTTGTTTT
GTTGGCTTAATTTTAGAGAACTGTGAACTTCCATGTGCTAATCACGGCCATGTCATACTT
GGAGATCCTTCGCCAATTCTTTTCTATCCTATAAGCAGTACAGAGATTCGTTGTCTGGTT
GATGTACCTGGAACGAAGGTTCCTTCTATTTCAAACGGTGATATGACAAAGTATCTAAAG
ACGACAGTTGCTCCACAGGTCCCCCCTGAGCTTTATGATGCATTCATAGCCGCAGTGGAC
AAAGGCAACATAAGGACAATGCCAAACAGAAGTATGCCAGCAGATCCTCGTCCTACTCCT
GGAGCCGTACTGATGGGAGATGCATTCAACATGCGTCATCCACTAACAGGGGGCGGAATG
ACCGTAGCATTGTCTGACATTGTGGTGTTGAGAAATCTTCTCAAGCCTATGCGTGACCTG
AACGATGCACCTACACTTTGCAAATACCTCGAATCCTTTTATACCTTGCGGAAGCCTGTG
GCATCCACCATAAATACATTGGCAGGAGCCCTTTACAAGGTTTTCAGTGCATCCCCCGAT
GAAGCAAGGAAGGAAATGCGCCAAGCTTGTTTTGATTATCTCAGCCTTGGAGGCTTATTC
TCAGAAGGACCGATCTCTTTACTTTCAGGATTAAACCCTCGGCCCTTAAGCTTGGTTCTC
CATTTCTTTGCTGTCGCGGTATTTGGTGTTGGCCGTTTACTATTACCATTTCCTTCACCT
AAGCGGGTGTGGATTGGAGCTCGATTACTCTCTGGTGCATCTGGAATCATTTTACCCATA
ATTAAGGCCGAAGGAATTCGGCAGATGTTTTTCCCTGCCACTGTTCCAGCTTATTACAGA
GCTCCCCCGGTAAATGCATTTTGAAAAAATAAAGTTGCTATCAAGATGAGCTAGCTTTAT
CACCCATTCTTGAGAATTTGATGAAAGGTTGATGCTAATAGATATATGTATACATTTTGG
CATAGTGTGTATTCTTTGTAGTTTGTAACTGGTACGATCTCAAAAGTGCATGTATTTCAG
TTCCTTTTTGCTATTTTAGAAAATTTAATCCATTACATACCAGACTATAACTACCATCCC
TCTTAATTAGATGTTATGAGTCCGAATGTAGTCCTAGAGGCTAGAAATGCACCAACGTTA
AGACTCTTGAGAGAGAGTTTTTTGCTATTATGGTCCTATTCGATTCGATAATTAGTCTTT
GCGGCTGCACTTGGAGCATATCCAAGTTTCTGACACAAAAAACCAGCTAAAATACCATCC
GCAATTCATCATAACACTGCGTTTGATATCATTCTCTGATATCAATTGTCATTGT
|
| EST members of Unigene |
BT053188 AJ430608 AL381072 AL380290 AL380289 AL376846 AL375935 AL375934 AW207997 CX525738 CX525126 BF644448 EV262349 AW685219 BG645854 BG587847 AW773687 AW736420 BI271229 BG454596 BF521162 BF520860 AJ845812 AJ845805 AJ845659 AJ845349 AJ845311 BM779336 BM779252 AW257425 BE204611 BE204567 BE203550 BF638947 CX520518 CX518071 CX532536 CX532183 CX529908 BG646614 BF003790 BE202891 AL370993 AL370992 AL369936 AL369928 AL369927 AL369738 AL369737 AL369197 AL369196 AL367601 AL367600 BI267416 BE321171 EY477999
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Metabolism > Biosynthesis of Secondary Metabolites > ko00900 Terpenoid biosynthesis > K00511 squalene monooxygenase;
Metabolism > Lipid Metabolism > ko00100 Biosynthesis of steroids > K00511 squalene monooxygenase |
| EC |
1.14.99.7 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.10468.1.S1_at, Mtr.2438.1.S1_at
|
| Corresponding NCBI Gene |
842213
|
| Trichome-related Gene from Literature |
N/A
|