| Acc. |
TCMT46382 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Probable polyamine oxidase 4 OS=Arabidopsis thaliana E-value=0; Probable polyamine oxidase 2 OS=Arabidopsis thaliana E-value=0; Polyamine oxidase 3 OS=Arabidopsis thaliana E-value=0; Lysine-specific histone demethylase 1 homolog 2 OS=Oryza sativa subsp. japonica E-value=4e-45; Lysine-specific histone demethylase 1 homolog 3 OS=Arabidopsis thaliana E-value=1e-43; |
| Length |
1987 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MtBB_NOD (7 ESTs); MT_INSECT (5 ESTs); MT_DSTEM2 (5 ESTs); MT_NOD_ROOT (5 ESTs); MT_SEEDROOT_KV3 (5 ESTs); MT_LEAF_PHOMA (4 ESTs); MT_GSEED (3 ESTs); MT_NOD_GVN (3 ESTs); MT_HOGA (3 ESTs); MtBA (3 ESTs); MT_IROOT_DSIR (2 ESTs); MT_DSIL (2 ESTs); MT_ECELL (2 ESTs); MT_SROOT_KV0 (2 ESTs); MT_DROOT (1 ESTs); MT_DFLOWER (1 ESTs); MT_GPOD (1 ESTs); MT_Shoots (1 ESTs); MT_SROOT_KV2 (1 ESTs); MTFLOW (1 ESTs); MT_ROOTPHOS (1 ESTs); MHRP-root (1 ESTs); MT_MGHG (1 ESTs); |
| Sequence |
ATTTGCACAAGCGGTGGAGAGAGAAACAACGAGATTTAGAGAGAGAATTTCTTCTTATTC
TTGTTTTTGATATACAAAACAATTGTATAACAAGAACCACATGCAGAAATCGTCGAATAT
TGTTCTTCTTCTTCTTCGGCGATTTTGATCCAATTATCCATCCTTATGATATTGTTCGAG
AAGTTGAGTTTCTCTCCTTACCTCAGCCGCTTCATTGCTGGCATCCTTCTTTTGATATTC
TGTAATTCCTTTCAATTAGTTTCCAATTTCCCTAATCCTATACACCACCACCCTTTTTGA
TTCAATTTCAACTCTCTGTTCATTCTTTCATTCTCAATTTCAATTCAATTCATTTCATTC
TTCCTTTGCAATGGACCCCAAGCTCTTCTTCTCTAACAATTTTCTCGATGGCACTATTAC
ATCACTCATTGATAGCCAACAAAGACCAGCTCCCTCAGTTATAGTTGTTGGTGCTGGAAT
CTCAGGGATTGCTGCAGCACGTATTCTCCACGATGCATCTTTTAAGGTCACCCTTTTGGA
GTCACGAGATAGGCTTGGTGGTCGCATTCATACCGACTACTCGTTTGGTTGTCCAGTTGA
CATGGGAGCCTCGTGGCTACATGGAGTTTGTAATGAGAATCCCTTGGCTCCATTGATACG
TTGCCTGGGGCTTACACTATATCGTACAAGCGGTGACGACTCTGTCTTATATGACCATGA
TCTGGAAAGTTGTATGCTTTTTGACATTGATGGCCATCAAGTTCCACAACAGACAGTCAT
TGAAGTTGGAGAAACTTTCAAGAGAATTTTGGAGGAGACAGGGAAAGTGAGGGATGAGCA
TCCTGAGGACATTTCAGTTTCTGAAGCGATTTCAATTGTGCTGGATAGGCATCCACAACT
AAGGCAACAAGGACTTTCCCATGAAGTGCTGCAATGGTATATATGCAGGATGGAAGCTTG
GTTTGCCGCTGATGCAGATATGATTTCACTGAAAACCTGGGATCAGGAACATGTACTCTC
TGGTGGTCATGGGCTCATGGTGCAAGGATATAAGCCAGTTATAAATGCTCTTGCAAAAGA
TATTGATATACGCTTGAATCACAGGGTGACTAAGATATCCAGTGGCTACAATAAGGTAAT
GGTTACCTTGGAGGATGGCAGGAACTTTGTTGCTGATGCTGCTATCATAACTGTTCCTAT
TGGAATCCTAAAAGCTAATTTAATTGAGTTTGAACCAAGACTTCCTGATTGGAAAGTTTC
CGCAATTTCAGATCTTGGTGTAGGCAATGAAAATAAAATTGCACTGAAATTCGACAAGGT
GTTTTGGCCTGACGTAGAACTTATGGGTGTTGTTGCTCCTACCTCTTATGCATGTGGCTA
TTTTCTCAATCTCCATAAAGCAACAGGCAATCCTGTTCTTGTTTATATGGCAGCTGGTAG
GTTTGCTTATGACCTTGAGAAGTTATCTGATGAGTCAGCAGCAAATTTTGTGATGTTACA
GCTTAAGAAGATGTTTCCTGATGCTTGTGAGCCAGTTCAGTATCTTGTGTCACATTGGGG
AACAGATCCAAACTCTCTTGGTTGTTACTCTTATGATTTGGTTGGAAAATCAATGGATGT
GTATGACAAGCTACGTGCACCCTTAGGTAATATATTCTTTGGCGGGGAAGCTATGAGCTT
AGACAACCAGGGATCTGTGCATGGAGCTTATTCCGCTGGGGTTATGGCTGCTGAAAACTG
TCAAAGATATCTTTGGGAAAAACAAGGCAACTTAGAAAGCCTGTCTCAAGTTTCTGCTAG
ACATGAAACATTAGGAACAAACTTTCCTCTTCAAATTTCGAGGATATGACTTGTTTTCAT
TTGCTTTTGAAAATGAAAGCTTTTATTTGCATATCACAATGGCAAAGGCAAAATGTTGGC
CATTTGGATATAATAATCAATTACTGTTTTGGATAGTAATCTATTTTAATTTTTGAGTTC
TTAACAT
|
| EST members of Unigene |
AL381085 AL380831 AL380830 AL378949 AL378948 AL375836 AL375835 AW686954 CX541423 CX536977 BQ145851 AW560099 AW560098 CX527805 AW693132 BE325284 AW695198 AW695036 AW687970 BF649240 BF643283 BG583775 BG580402 AW980611 AW685749 AW685874 AW685788 AW685640 AW684788 AW287857 BE239347 CB892580 CB892204 CB892197 BG644755 AW774696 BQ148569 BQ140822 BQ139511 BQ139065 BQ138865 CA917613 BF520195 AW775532 AW257202 BE204703 BE204650 CB894561 CB893804 BG646781 AJ496845 AL368821 AL368343 AL368342 BE941442 BI268045 BI266946 BI265687 BF642780 BF640308
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
1.-.-.- |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.47774.1.S1_at
|
| Corresponding NCBI Gene |
842894
|
| Trichome-related Gene from Literature |
N/A
|