| Acc. |
TCMT52879 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Autophagy-related protein 8h OS=Arabidopsis thaliana E-value=2e-44; Autophagy-related protein 8i OS=Arabidopsis thaliana E-value=3e-44; Autophagy-related protein 8D OS=Oryza sativa subsp. japonica E-value=1e-40; Autophagy-related protein 8A OS=Oryza sativa subsp. japonica E-value=1e-35; Autophagy-related protein 8A OS=Oryza sativa subsp. indica E-value=1e-35; |
| Length |
1157 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MtBC_GLOMUS (2 ESTs); MtBA (2 ESTs); MT_JCVI-MT2 (2 ESTs); MTAMP (2 ESTs); MT_PhoLEAF (2 ESTs); MT_VILEAF (1 ESTs); MTAPHEU (1 ESTs); MT_KVKC (1 ESTs); MT_ECELL (1 ESTs); MT_JCVI-MT1 (1 ESTs); MT_MGHG (1 ESTs); MT_NOD_GVSN (1 ESTs); MT_JCVI-MT3 (1 ESTs); MT_ROOTPHOS (1 ESTs); MT_GESD (1 ESTs); MT_SEEDROOT_KV3 (1 ESTs); MtSNF (1 ESTs); |
| Sequence |
GGGATTGAGCAAACAACGCGCAAGAGTCTCATTGTCACTTTCAAAGTCTATCCTCCGGAA
GATACAAAGCCATAAGGGTATTCATCAGATGCTAAAGCTTCTCCATGTTCATCTCGAACA
ATCGCACCCAAAACCCAGGTATCAAGTTGAGCTGCCTTGCATGCTATTTGTTCTATTGTT
GCTGTCGATGTCGAAGCTTGTTCAAATAAGAAATTTATTATTTTTTGACAAATAAGAAAT
TTATTAATTAACTAATTAATTATTTTTGTGGTACTTGACGTGTTTCTGTTGTTGATTGAC
ATTGACTTACACGTTAAATTGACGGTGGACGCAACGGAATATTATAGAATCATTTCAACC
AATTCCTTCCATTTTCTTCATTACAACTTCAATTTCAATCACGATAAATACTCTGCTATC
TCAAACCTATAATTCATATCAATATCATGGGCAAGATCAATTCCTTCAAACAAGAATTCT
CTCTCGATGAACGACGCAAGGAATCACAGAGCATCATTGTTAAATATCCCGATCGAATTC
CCGTCATCATTGAGAAATATTCTAGGACAGACCTACCTGAATTGGACAAGAAGAAATACT
TGGTTCCTCGAGACATGTCTGTTGGACAGTTTATTCACATTTTAAGTAGCAGGCTACGTT
TGACTCCTGGGAAAGCTCTGTTTATTTTTGTGAAAAACACGCTTCCTCAAACTGCTAGTC
TTATGACCTCCATCTACCAAACTTACAAGGAGGAGGATGGGTTTCTGTATATGTGTTACA
GCAGTGAGAAAACATTTGGTTAACTTGGTTGCATGATTTGCATTTGATGATTAATTCCTT
CAAGTATTTGTCAATTGTGTATTGTTATTTGTAAATAAATTCAGTACATGATGTACTTGT
ATGTATGACATAACATCACCGAATCTCCAATTTAAACAACGATTTGTTGTACATTAAATA
AAATGTATATTGTAAAGATTTAGATCCATATTTTTTTTTTCATGTTAAGAGTAGCGGACT
AGCTGACTTGGTATGTCAAACGTCCAATTAGAATATAGACATGTAGGTAAATTGAAGATT
GTTACACTCATAGATTGCAGGATTGACAAGGTGTAGTTGATTTGTACTATTGCTAATTTT
CTTTGATTCTTTGATTC
|
| EST members of Unigene |
AL385984 AL385983 AJ548128 BF644236 EV256999 BE999878 AW329564 AJ503639 AJ501121 BI311934 AW773689 AJ845951 BG456239 BF638249 CX522922 BQ750434 AL373354 AL373353 BE941411 EY478845 GE348845 GE343672
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04140 Regulation of autophagy > K08341 GABA(A) receptor-associated protein (autophagy-related protein 8) |
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
1.A.9 Ligand-gated ion channel of neurotransmitter receptors LIC |
| Probeset |
Mtr.40589.1.S1_at
|
| Corresponding NCBI Gene |
819816
|
| Trichome-related Gene from Literature |
N/A
|