| Acc. |
TCMT56003 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Shikimate kinase, chloroplastic OS=Arabidopsis thaliana E-value=3e-84; Shikimate kinase, chloroplastic OS=Solanum lycopersicum E-value=9e-80; Shikimate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) E-value=7e-32; Shikimate kinase OS=Synechococcus elongatus (strain PCC 7942) E-value=7e-32; Shikimate kinase OS=Microcystis aeruginosa (strain NIES-843) E-value=5e-30; |
| Length |
1416 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_JCVI-MT3 (3 ESTs); MHRP-root (2 ESTs); MT_SROOT_KV2 (2 ESTs); MtBC_GLOMUS (2 ESTs); MT_ROOTPHOS (1 ESTs); MTAMP (1 ESTs); MT_LEAF_PHOMA (1 ESTs); MT_DLEAF (1 ESTs); MT_SROOT_KV0 (1 ESTs); MTUS_MIXTISSUE (1 ESTs); MT_VILEAF (1 ESTs); MT_KVKC (1 ESTs); MT_Shoots (1 ESTs); MT_MGHG (1 ESTs); MT_JCVI-MT1 (1 ESTs); |
| Sequence |
GCTAACTAACACTTTCATCGTATCACCTTCGTCCATTCCAATTAGATTTTGCTTCCACTC
CATTCTTTTTCTTTCATTTCTCAAACAAATCTACCAGTGTGTACTGTGTATTGCCGCTGT
ATGTAATGGATGCTAAAGCTGTTCAAATGTTGCATCTACCGGTTCTGACCCGACCCGATA
ATTGTGTGAGAATAACCGGTTGTTCTTTGAGTCGGACCGGTAAACTGAAAAAGCTTCAGA
CGATTCGGCGCAAGAAGGTTTCTCTGGAAGTTGCTTGTTCTTATAACAATATTCCAGCTT
CAACATTGGAATCTGGAGGGCATAAGTTTCCCCTTGAGGAAGAGTTGGTTCTGAAGAATA
GATCGCAACAGATTCTGCCGTATTTAAGTGGGCGCTGTATATATGTTGTTGGAATGATGG
GCTCTGGGAAGACAACTGTGGGAAAAATTATGTCGCAAGCGCTTAGCTATTCATTTTGTG
ATTGTGATACATTGATTGAGGAAGAGGTTGATGGAAACTCTGTGGCTGATATATTCAAGC
TCTATGGAGAATCTTTCTTTCGTGAGAAGGAGACTGAGGCATTGAATAAGCTGTCCCTGA
TGCACAAACTTGTCATTTCTACGGGTGGAGGTGCTGTTGTGCGGCCTATTAATTGGAAAT
ATATGCACAAGGGGGTTAGTGTTTGGTTAGATGTACCAGTGGAAGCATTGGCCAAAAGAA
TTGCAGCTGTGGGAACTAATTCTCGCCCTCTTCTACACGATGAAGCAGGAGATGCATACA
CAGCGGCTTTGATGCGTCTGTCTGCTCTTTTTGAAGAGAGAGGTGAATTCTATGCCAACG
CCAATGCTAGAGTCTCATTAGAAAATATAGCAACAAAACTGGGCCGAAAAGATGCGTCTG
ATTTGTCTCCAACTGAAATTGCAATTGAGGCGCTAGAGCAAATTGGCAACTTCTTAAAGG
CAAAAGATGGTGGTTATGCAAGATAGTAGTACGATTTGGCGTACCCGTGTTTTGATTGTT
TATATTTTTTTTCCTTCAATTTGCAGTTTGCAATTAAGGCCATGCTGTTGTGCAGTGTTG
TTTTAAGTGTGAAAATAAAAATAAATGTAGCTTGCCACATTTTTTATACATAATTTTTGT
TGGGAATTAAGCTTCATGTGACAGCCAATGGCAACAGTTTGAATTTCTAGGTTTTTTTTT
TTATCATTGATGTATATACTACTATATATTCCGGTTGACCACCCCACTTAATGGGATAAG
GCTGAATTGTTGTTGTATTGTAGTTGACGAAGTTTTTGCTTTAAATTGAGTTTGGTTGAT
CAGTTAATGTGTGACTGACTTCCTGTAAGAGATTGTATGTTGTAAAATGACACTCTATCT
TATTCTATTTTGGGTCTTAATTGTCCTTCATGCTTC
|
| EST members of Unigene |
CA922808 AL388176 AL388175 CX525553 EV257523 AW125984 AJ502658 BG588126 BE240643 BQ139578 BE249774 BM780225 AW585314 BE204407 CX522211 BQ165009 BE940959 EY478062 EY474428 EY474794
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.10645.1.S1_at
|
| Corresponding NCBI Gene |
816730
|
| Trichome-related Gene from Literature |
N/A
|