Detail of EST/Unigene TCMT42125
Acc. TCMT42125
Internal Acc.
Type TC/Unigene
Annotation (Top 5 hits in Uniprot_trembl) Carbamoyl-phosphate synthase small chain OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) E-value=0; Carbamoyl-phosphate synthase small chain OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) E-value=0; Carbamoyl-phosphate synthase small chain OS=Synechocystis sp. (strain PCC 6803 / Kazusa) E-value=0; Carbamoyl-phosphate synthase small chain OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) E-value=0; Carbamoyl-phosphate synthase small chain OS=Synechococcus elongatus (strain PCC 7942) E-value=0;
Length 1869 nt
Species Medicago truncatula
Belonged EST Libraries MT_SROOT_KV0 (2 ESTs); MT_CDS (2 ESTs); MT_Drought (2 ESTs); MT_INSECT (2 ESTs); MT_JCVI-MT1 (2 ESTs); MT_DLEAF (2 ESTs); MT_PhoLEAF (1 ESTs); MT_GSEED (1 ESTs); MT_Shoots (1 ESTs); MT_NOD_GVN (1 ESTs); MT_DSLC (1 ESTs); MT_SEEDROOT_KV3 (1 ESTs); MT_DFLOWER (1 ESTs); MT_SROOT_KV2 (1 ESTs);
Sequence GGAACCAGCCCCACCCCGCGCTTCTTCTGTTAATCACCGAATCCTCTGTTAATCACCCCA
CTCTCTCGCAGCTCGCATCCCTGACACCGGCGACGGCGCCGCCCCTCTCCTCCTGTCATC
ATTTCCATAATCCCTTCTTCAGACATCTCTCTGCATCGGTGTTACCAGCAAGAAGAAACA
AAGATAATGGCGACAAAAGCTTTGGCCTTCACCCTATCTCTCAATGACTGCTTTGGTTCC
AAATCGCCACACACTGCTTCAAAAGTTTCCGTTTTCTCTGTCAGATGTTCCACTGGTAAT
GGAGAAAGGCCATGGAAAAATTCAGATGCTAGACTTGTGCTAGAAGATGGTTCAATTTGG
AAAGCTAAATCATTTGGTGCTTCAGGAACCCAAGTTGGTGAAGTTGTTTTCAATACATCA
TTGACTGGGTATCAAGAAATTTTAACTGATCCTAGTTATGCTGGACAGTTTGTTCTCATG
ACAAATCCGCATATTGGGAATACTGGCATAAATTTTGATGACGAGGAATCAACGCAGTGC
TTTCTTTCTGGTCTAGTAATTAGAAGTTTGAGTATCAGCACCTCAAATTGGAGATGCGAG
AAAGATTTAGGCGATTACTTAACAGAAAGGAATGTCATGGGAATTTATGATGTTGATACA
CGGGCAATCACACGCAGATTACGAGAAGATGGAAGCCTTATTGGTGTTTTGAGCACCGAC
AATTCCAAAACAGACGAGGAATTGCTCCAGATGTCTAAATCATGGGATATTGTCGGTATT
GATCTAATAAGTGGAGTATCGTGCAAATCTCCACATGAATGGATTGATAGAACAAGAGAA
GAATGGGAGTTTAGCTCTAGTGAAGGGCCTAGAGACACTTTCCATGTAGTTGCTTACGAT
TTTGGAATCAAACATAATATACTTAGGCGGCTAGCATCTTATGGCTGTAAAATCACTGTT
GTGCCATCTACATGGCCAGCTTCTGAAACTTTGAAGTTAAATCCAGATGGCGTGCTTTTC
AGCAACGGCCCTGGAGATCCATCTGCTGTTCCTTACGCTGTTGAGACAGTAAAGAATATT
ATTGGTAAGGTGCCTGTTTTTGGGATTTGCATGGGACATCAATTGCTAGGCCAGGCTTTA
GGAGGCACGACCTACAAGATGAAATTTGGTCACCATGGAGGAAATCATCCTGTTCGTAAC
CTTCGAACTGGTCGTGTTGAAATTAGTTCTCAGAACCACAACTATGCGGTTGACCCTGCT
ACACTGCCTAAAGGAGTAGAGGTTACTCATATCAATCTTAACGACAGTAGTTGTGCTGGC
CTTGCTTTCCCTGCTCGAAAAGTTGTGTCTCTTCAATACCACCCTGAAGCATCCCCTGGA
CCTCATGATTCTGACAACGCTTTTAAGGAGTTTGTAGAGCTAATGAAGCAAGGGAAAAGC
AAAACATCGAATGAAAACCTACACCAACTACAATCGGTGTAGGTCATTAAAGCGAGCTGC
TATCCCACCAGGCTAGAAGAATTAAGTATTAAAGTATGTTATAAAAGCTCAGCTTCTTAG
TAGTTTTGATCTATGGTTTGTAGATGAATAAGGACTTCCTTGGGGTTGATCAAGATTTTC
TTGTGTCCATTTTCTGTAGAAGGGTTAGCAGCCGATTGTCATAGGCTGATAGTCTTCATT
GAAGGTTAATGTGCTCAATGTAGTATCAAGAAGTACTCAATTCAGTACCAAGAACTGTGT
TTTTAGCTAGCTATTTTTGTTAACCGGGTGGTTTATTACTGCTACAACTTGGGATGTTGA
GAGTGAAACTTATAATTTATTTATAACAGACCCTTGCTTTATTTGTTATGAAAAAAAAAA
AAAAAAAAA
EST members of Unigene BT052561  BT051601  CX539690  CX523965  EV261425  EV255018  BG581565  BF005367  BG645015  BQ147737  BG454818  BG452574  AW256697  BE204992  BE204900  BE324521  BF636388  BF631882  BG449315  BG448816 
InterProScan Domain  
Gene Ontology  
KEGG Orthology Metabolism > Energy Metabolism > ko00910 Nitrogen metabolism > K01948 carbamoyl-phosphate synthase (ammonia);
Metabolism > Amino Acid Metabolism > ko00330 Arginine and proline metabolism > K01948 carbamoyl-phosphate synthase (ammonia);
Metabolism > Amino Acid Metabolism > ko00251 Glutamate metabolism > K01948 carbamoyl-phosphate synthase (ammonia);
Metabolism > Amino Acid Metabolism > ko00220 Urea cycle and metabolism of amino groups > K01948 carbamoyl-phosphate synthase (ammonia);
Metabolism > Nucleotide Metabolism > ko00240 Pyrimidine metabolism > K11540 carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase;
Metabolism > Amino Acid Metabolism > ko00252 Alanine and aspartate metabolism > K11540 carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase;
Metabolism > Amino Acid Metabolism > ko00251 Glutamate metabolism > K11540 carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase
EC 2.1.3.2  3.5.2.3  6.3.4.16  6.3.5.5 
Transcription Factor Family
Transporter Classification Family
Probeset Mtr.28750.1.S1_s_at, Mtr.43247.1.S1_s_at
Corresponding NCBI Gene 822396 
Trichome-related Gene from Literature N/A