| Acc. |
TCMT52641 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 OS=Solanum tuberosum E-value=0; 3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Nicotiana sylvestris E-value=0; 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 OS=Hevea brasiliensis E-value=0; 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 OS=Hevea brasiliensis E-value=0; 3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 OS=Capsicum annuum E-value=0; |
| Length |
2542 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_JAS_ROOR (17 ESTs); MT_JCVI-MT2 (4 ESTs); MT_SIRRA (4 ESTs); MTUS_MIXTISSUE (3 ESTs); MtBA (3 ESTs); MT_SEEDROOT_KV3 (3 ESTs); MT_DLEAF (2 ESTs); MT_DSIL (2 ESTs); MT_SROOT_KV2 (2 ESTs); MT_ECELL (2 ESTs); MT_SROOT_KV1 (2 ESTs); MT_NOD_GVSN (2 ESTs); MT_NOD_GVN (2 ESTs); MT_JCVI-MT3 (2 ESTs); MT_CDS (1 ESTs); MtSNF (1 ESTs); MtBB_NOD (1 ESTs); MT_Shoots (1 ESTs); MT_PhoLEAF (1 ESTs); MT_DSTEM2 (1 ESTs); MT_JCVI-MT1 (1 ESTs); MT_INSECT (1 ESTs); |
| Sequence |
CCTCCCTCCCTCTCATTTTCCAACCAATCAAACAAAAACTTTCAAAACCCTTTCCCTCGT
TTTTCGCTTCTGGGTTTTCTTTCCATTTTTCTCCTTCGTTTTTTGTTTCTGCATTTTCGT
AGATTCAAAACTCGTCGGAAAAAATATGGACGCTCGCCGGAGACTTAAATCTCTTCCTCC
ACGTTCTCCCGCCGGCGGCGAAAACCTCAAAACCCAGAAGCTTAAATCTCTTCCTACCAC
CACCACCGGAGAAAACCTCAATTCACAGACTGTTTTTCTCTGTGTCACTAACGCTGTTTT
CTTCGGTGTTTTCTTCTCCGTCGCGTATTTCCTCCTCCACCGTTGGCGTGAGAAGATCCG
TACGGAAACTCCTCTTCATGTCGTCACAGTCTCAGAAACCGCCGCCATCGTTTCTCTCAT
AGCCTCCGCCGTTTACCTTCTAGGTTTCTTCGGTATCGGATCACGTACTTCCTTCCCGGA
CGATCTCTCCGATGAAGAGATTCTCGCTAAAGAAGACTCACGAAAACCAGGACCGTGTCC
AGCAGCACTTGTCGACACCGACGTAAAACCACCACCAGCAACATTAACTCCAATTGTAGC
TCCAGTGAAGATCTATGAAGTTGTTGCACCCGTGAATCTCACACCGGAAGACGAAGAAAT
TGCAAAATCAGTTGTCACCGGTTCAATTCCGTCGTATTCCTTAGAATCCAGACTAGCAGA
CTGTCGTAAAGCGGCGGCGATACGTCGTTCAGCGGTGCAAACGATAACTGGAAAATCTCT
AGAAGGTTTACCGTTGGAAGGTTTTGATTACGATTCGATATTGGGACAGTGTTGTGAGAT
GCCCGATAGGGTTTGTTCAAATTCCGGTTGGTGTTGCGGGTCCACTGTTGTTAGATGGAG
TTGAGTACACTGTGCCCATGGCTACCACTGAAGGGTGTCTTGTTGCAAGTACTAATAGAG
GGTGTAAAGCTATTCATGTTTCTGGTGGAGCTTCTTCTGTTTTGCTTAGAGATGGAATGA
CCAGAGCACCTGTTGTTAGGTTTTCGTCGGCCAAAAGAGCTGCTGAGTTGAAGTTTTTCT
TGGAAGATCCGCTTAATTTTGATACACTTGCTGTCACTTTCAACAAATCAAGCAGATTTG
CTAGATTGCAGAGCCTTCAGCCGACAATTGCTGGCAAGAATTTGTACATTCGTTTCCGTT
GTAGTACTGGTGATGCCATGGGGATGAACATGGTGTCAAAAGGTGTTCAAAATGTCCTTG
ATTTTCTTCAGAGTGACTTTCCTGACATGGATGTCATTGGAATCTCAGGAAATTTCTGTT
CCGACAAGAAAGCGGCGGCTGTAAACTGGATTGAAGGGCGTGGTAAGTCTGTGGTGTGTG
AGGCTGTTATTAAGGAAGAGGTTGTGAAGAAAGTGTTGAAGACTAGTGTGGAGGCACTGG
TTGAGCTTAACATGCTTAAGAACCTAACTGGATCAGCCCTTGCTGGTGCTCTTGGTGGGT
TCAATGCTCATGCTAGCAACATTGTCTCTGCTGTCTACATAGCCACTGGTCAAGATCCTG
CTCAGAATGTGGAGAGTTCTCATTGTATTACCATGATGGAAGCTGTGAATGATGGCAAGG
ACCTTCACATTTCTGTCACCATGCCTTCCATTGAGGTTGGTACTGTGGGAGGGGGAACAC
AACTTGCATCTCAGTCAGCTTGTCTTAATTTACTTGGTGTTAAGGGCGCCAACACAGAAT
CTCCAGGTGCAAATGCTAGGCTATTGGCCACCATCGTAGCTGGTTCGGTACTTGCCGGCG
AGCTATCACTCATGTCTGCAATTGCAGCTGGACAACTAGTTAAGAGTCACATGAAATATA
ACAGATCTAGCAGGGATATGTCCAAAATCGTCTCGTGAGCTGGCCTCACACAACACAACA
ATAAACTTGTAGAAGGGACCAATGCCTCTCATAAGGACAAAAAAACGACCAAAAAGATCG
TATAGTTGGTTTTCAAAAGGACTGTTGGTGGTGGCCATGGGGTGAATAAAAAAATGATGA
TCAGCATCTTTTTGAGCTCAACAAGAGCATGTGGTAAGAACAAAAAAATAGAAAAGGTTG
CATCTAGTGGTATTCAACACCTTAGTCCATGTGGGAGGCATTGTCTTTTATGAGATTGTA
CAGAAGTGTTGAATCAGAAGATGGAGAAAACAAGTGGCTAAACCTTTGGCATTAGTTTGA
TTCTTTTTATTTTATTTTGTTTTAATTTATTCTGTATTGTGTCATTTCTCTTGTCGAAAG
TTATTGCCTCAAAAATTTGTTATTTTAGTGTGTCTGTGTGTGGAGTATTTTGATGTAGAG
TTGTTAATAATAGTCTCTGGTTGGCCATCACTATACACTACTTTTTTCTATCTCTTCAAT
TCTTGTCTTTTGGTGGTTGGCACTTTGTCCAAATACTTTGGATGTCGGTATTTCCAAAAT
AATTTTCATAGAGATTCTTAGACAAGAGAGTTTTAAGGGATATTCCTATGCCGGTTTTAC
TTATCTATCTTAATCTTGATCA
|
| EST members of Unigene |
EU302817 CF069994 CA922332 CA920304 AL379533 CX527240 AW695930 BF650114 BF649659 EV254770 BE999267 BE999266 BG582893 AW574022 CB891996 AI737481 AI737480 BG453563 BG452805 BF519246 AW776995 AJ845735 BM779323 BM779148 BG457078 BQ157419 BQ155947 BQ155316 BI269664 CX534563 CX534464 CX533728 CX533184 CX532890 CX532706 CX532444 CX531734 CX531680 CX531395 CX530533 CX530223 CX530089 CX529316 CX529295 CX529032 CX528975 BF003586 BE203139 AL369104 AL367465 AL367464 BG449368 EY478191 EY477342 GE350610 GE349899 GE345691 GE344872
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Metabolism > Lipid Metabolism > ko00100 Biosynthesis of steroids > K00021 3-hydroxy-3-methylglutaryl-CoA reductase |
| EC |
1.1.1.34 |
| Transcription Factor Family |
|
| Transporter Classification Family |
2.A.6 Resistance-nodulation-cell division factor superfamily RND |
| Probeset |
Mtr.34988.1.S1_s_at, Mtr.40158.1.S1_at, Mtr.48023.1.S1_s_at
|
| Corresponding NCBI Gene |
843982
|
| Trichome-related Gene from Literature |
843982
|