Detail of EST/Unigene TCMT42416
Acc. TCMT42416
Internal Acc.
Type TC/Unigene
Annotation (Top 5 hits in Uniprot_trembl) 40S ribosomal protein S16 OS=Gossypium hirsutum E-value=3e-70; 40S ribosomal protein S16-1 OS=Arabidopsis thaliana E-value=2e-68; 40S ribosomal protein S16-3 OS=Arabidopsis thaliana E-value=2e-68; 40S ribosomal protein S16 OS=Fritillaria agrestis E-value=3e-68; 40S ribosomal protein S16 OS=Tortula ruralis E-value=4e-64;
Length 1759 nt
Species Medicago truncatula
Belonged EST Libraries MtBB_NOD (12 ESTs); MT_GSEED (6 ESTs); MT_JCVI-MT2 (5 ESTs); MT_NOD_NOLLY (4 ESTs); MT_DFLOWER (4 ESTs); MtBA (3 ESTs); MT_JCVI-MT1 (3 ESTs); MT_DLEAF (2 ESTs); MT_DROOT (2 ESTs); MT_SIRRA (1 ESTs); MT_FLOSEED_MTY (1 ESTs); MT_JAS_ROOR (1 ESTs); MT_CDS (1 ESTs); MTGIM (1 ESTs); MT_SROOT_KV1 (1 ESTs); MHRP-root (1 ESTs); MTFLOW (1 ESTs); MTUS_MIXTISSUE (1 ESTs); MtBC_GLOMUS (1 ESTs); MT_LEAF_PHOMA (1 ESTs); MT_INSECT (1 ESTs); MT_JCVI-MT3 (1 ESTs); MT_GPOD (1 ESTs); MT_DSIL (1 ESTs); MT_TRI (1 ESTs); MT_DSTEM2 (1 ESTs); GLSD (1 ESTs); MT_ECELL (1 ESTs); MT_PhoLEAF (1 ESTs);
Sequence GGATAATACCAGAAAACATAGATATTCAAGGGAATTATCTATATCATATGAATTCAATAT
TGTAAAAAAAATCTATATGAACTCAGTCCATTGAATGAATAGCTTACAGTACAAAGTTAC
ATCGTAATCAGAACCTGTGTTCAAACAAATATAAAATCTAACACTGAATAATTTTATCAA
CTATAGACAGAGACCAAAACTTAAAAGAATAACTCAACAATAGCCACGAAATTATAGCTG
CTCTCAACTCTGACAATAACATGGCAGCATTTCAACTTCCTTGATCCAAATGACAATGGG
AATATATAGCTTACCATAAACACTACTTTTGCTTTTCAATCTGTACTTAAATTTCCTCGT
GCTTACAGTTTGGCCATTTATTTCGCATATTTTCAAGCCAAATATCGTGAACCTGATGTT
CACCACGGCAGTCAACATTAAGAATCCTCATCACCAGTTATGTATCCATTTGCTTTGCAT
ATTTTGAATATTCGGAGCTTCAAATATGATTCTAATGTTTCTTTAATTACAGTAGTGCCG
TGTATGAGGGATGGAGTGTTAAAAATTTGTTACAAGACGCCACATTTTCTGGGGGTGCTT
TTCAATCATTGGGTCATCATGAATCTGATCTGGGAGCTGTAAAAGATGAAAGAAGACCAG
CTGCCTGAGCAGGTAGAATATCTCCAAATGTAGACATAGCTGCTGCAGATCTATCCTTAA
AAATACCAACTTGCCCATCAGTTAGCATTGATCCCAGTTTAAAAGTACTCTCCCCAAACC
TGCTTCCAACTTGCATGAAAGACTTCAAAAATGGTGCTGCTACCCCAAGACTTGAGCTGT
CATCCAAATTTATCTTTTGAGAAAGATCTCCATTTGTAATCGAATTCCATGAACTTCTTG
AAGAGATTTCATTCGAAGATGGGGTGAATGTCTTCTTTGGCCCTCTAGAGGACAATGCTG
GAGCACTGATGGGGAGGTATTTAAACCGGGGAACTGTAGAACACCTCAGAGTATTAGATT
CTGAATTAGTAGGCAATTTCTGAACAGTATCTGTGTACATTCGATTAAGTTGCACAAAGA
AACCAAAAAGAACAGCATGTCGTAGATATGACTGCCTCTCATTCTCTCAAAACCTGTGTG
CTTCAGCTGCTGGTGTTGGTTACGGCGGAGAGAGAAAGAAGCTCAGCAAAATGGAACAGG
TGCAATGCTTTGGCCGGAAGAAGAACGCCGTTGCAGTTACCCACTGCAAGAGAGGTCGCG
GTCTCATCAAGATTAATGGCTGTCCAATCGAACTGGTGGAGCCTGAGATTCTTCGTTTCA
AGGCATACGAACCAATCCTCCTTCTCGGCAGACACCGTTTCGCCGGAGTTGATATGAGGA
TCCGTGTGAAGGGTGGAGGTCACACTTCTCAGATCTATGCCATTCGTCAGAGTATTGCCA
AGGCTTTGGTTGCTTACTATCAGAAATATGTTGATGAACAAAGTAAGAAGGAGATTAAGG
ATATTCTTGTTCGTTATGATCGTACTCTTCTTGTTGCTGATCCTAGACGCTGTGAGCCTA
AGAAGTTTGGTGGTCGTGGTGCTCGTGCTAGGTTCCAGAAATCTTATCGTTAGATTTTTT
TTTATCTTTTCTTTCTGTTATTGGATTTGATATTTTCATGTTATTCGGTACTCTTGCTAT
GCACTTGTTTCAATTCAGTTTTGGTGGATTTTCAGTGGAATTATAAAAGATTTTGGTTAA
TTCAATTTGTGTGCTTTTT
EST members of Unigene BT053365  DY618328  DY617794  DY616609  DY616399  CA921094  AL385106  AL379257  AL379256  AL379218  AL379217  AL377624  AL377623  AL376143  AL376142  AL375014  AL373790  AL373789  AL373629  BE319285  BE319236  CX539708  CX538906  CX538828  CX536726  CX536651  BI268788  AW693507  BF645483  EV261013  EV260331  EV257109  DW016855  AJ500349  BE240676  BI273031  BI271344  BI270933  BI270408  BQ139157  BE316735  BF637247  CA917642  BF519746  BQ124877  BG456010  BQ155689  CX531391  BF003411  AJ497108  AL371816  AL371815  AL368542  BE321919  EY476132  GE352382  GE350273  GE348058  GE344238  GE345304  EX527016 
InterProScan Domain  
Gene Ontology  
KEGG Orthology Genetic Information Processing > Translation > ko03010 Ribosome > K02960 small subunit ribosomal protein S16e
EC
Transcription Factor Family
Transporter Classification Family
Probeset Msa.3064.1.S1_s_at, Mtr.45862.1.S1_at
Corresponding NCBI Gene 815456 
Trichome-related Gene from Literature N/A