| Acc. |
TCMT43235 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
VAMP-like protein YKT61 OS=Arabidopsis thaliana E-value=3e-95; VAMP-like protein YKT62 OS=Arabidopsis thaliana E-value=2e-79; Synaptobrevin homolog YKT6 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) E-value=2e-50; Synaptobrevin homolog YKT6 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) E-value=4e-48; Synaptobrevin homolog YKT6 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) E-value=1e-47; |
| Length |
1064 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MtBC_GLOMUS (3 ESTs); MtBB_NOD (3 ESTs); MT_VILEAF (2 ESTs); MT_JAS_ROOR (2 ESTs); MHRP-root (2 ESTs); MtBA (2 ESTs); MT_DLEAF (2 ESTs); MT_DSIL (2 ESTs); MT_DSTEM2 (2 ESTs); MT_JCVI-MT1 (1 ESTs); MT_SIRRA (1 ESTs); MT_FLOSEED_MTY (1 ESTs); MT_NOD_GVN (1 ESTs); MT_ROOTPHOS (1 ESTs); MT_HOGA (1 ESTs); MT_CDS (1 ESTs); MT_NOD_NOLLY (1 ESTs); MT_DFLOWER (1 ESTs); MT_Drought (1 ESTs); MT_JCVI-MT3 (1 ESTs); MT_GPOD (1 ESTs); MT_DROOT (1 ESTs); MT_Shoots (1 ESTs); MT_SROOT_KV2 (1 ESTs); MT_PhoLEAF (1 ESTs); |
| Sequence |
ATCATATAAAAGTACTCTCAATCTAATTTACCATTAACCCCTTAACACACCTCCTTCTAC
CGACTGCGTGCGAATCACAACAAAGAACAAAAAAACACAAAGCCGCGAAATAATATACCT
TCCAGAAAGAGAAAACCGAAAGCAAAAAGAAAAATGAAGATCACGGCTCTGTTGGTGCTA
AAATCCACCGGCGATGGTTCAGAATCGGTGTTTCTCGCAAACGCTTCCGATGTGAGTCAC
TTCGGTTACTTTCAACGATCCAGCGTTAAAGAGTTCATCGTTTTCGTAGGTCGTACCGTA
GCTAATCGTACCCCTCAAGGTCAGCGTCAATCCGTTCAGCACGAAGAGTACAAGGTGCAT
GCGTACAACAGAAATGGACTTTGTGCAGTGGGATTTATGGATGATCACTATCCAGTTCGT
AGTGCGTTTTCTCTTCTCAATCAGGTGCTGGATGAATATATTAAAAGTTTTGGTGAATCA
TGGAGAAGCATTCAGGCAGACAGTACTGAACCATGGCCCTATTTGAATGAAGCTCTTGCG
AAATTCCAGGACCCTGCAGAGGCTGATAAGTTGTTGAAAATCCAGAGGGAGTTGGACGAA
ACAAAAATCATCCTTCACAAGACCATTGATAGTGTGCTTGCACGAGGGGAGAAGCTGGAC
AGTTTAGTTGAGAAGAGTTCTGATTTGAGTGCAGCATCGCAGATGTTCTACAAACAGGCC
AAAAAAACCAACCAGTGCTGTACAATATTGTAAGCTTTAAAGACCGTCCGTATTATGCGA
GCTCGCCTGAATCCTGTTCCGACTTTGATGTTGTTGGATAGGGTGAAAATAGCTTCATAT
GTCTATATCACTCTACATTGTTTGTTTTGTGAAATTCTCTTCCCGATATATGTATTGCAG
ATGGGACCGAAATATTGGCCAAAGGTCTTAACAATGTTGTCAAATTAACATTCACATTTA
CCTGGTTTGAGATGCTTACTATGATAAATTATAGTGCTTTGCATATATAATTGTTTTTAT
GAAACCATTCTAGTTAATTTGTAAAAAAAAAAAAAAAAAAAAAA
|
| EST members of Unigene |
BT053527 DY616973 AL385677 AL384764 AL384763 AL379959 AL377891 AL377890 AW687515 CX525912 AW694697 AW696199 EV262634 DW017215 AW980784 AW125949 BG588194 BE240040 BQ146366 BG453961 BG452404 BI309422 BF519887 AW775475 AW299194 BI263179 BQ153805 CX519094 CX517051 CX534086 CX529134 CB065498 AL372210 AL366894 BF631838 EY477569
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04130 SNARE interactions in vesicular transport > K08516 synaptobrevin homolog YKT6 |
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.12403.1.S1_at, Mtr.31920.1.S1_s_at
|
| Corresponding NCBI Gene |
835918
|
| Trichome-related Gene from Literature |
N/A
|