| Acc. |
TCMT55753 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Probable sodium-coupled neutral amino acid transporter 6 OS=Xenopus tropicalis E-value=7e-24; Sodium-coupled neutral amino acid transporter 2 OS=Pan paniscus E-value=3e-22; Sodium-coupled neutral amino acid transporter 2 OS=Homo sapiens E-value=3e-22; Sodium-coupled neutral amino acid transporter 3 OS=Rattus norvegicus E-value=4e-22; Sodium-coupled neutral amino acid transporter 3 OS=Homo sapiens E-value=4e-22; |
| Length |
2353 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_SROOT_KV1 (6 ESTs); MT_INSECT (5 ESTs); MT_GSEED (4 ESTs); MT_Shoots (4 ESTs); MT_DLEAF (4 ESTs); MtBC_GLOMUS (4 ESTs); MT_Drought (3 ESTs); MT_DFLOWER (3 ESTs); MT_SROOT_KV0 (2 ESTs); MT_NOD_GVSN (2 ESTs); MT_NOD_GVN (2 ESTs); MT_MGHG (2 ESTs); MT_LEAF_PHOMA (2 ESTs); MT_HOGA (1 ESTs); MtBA (1 ESTs); MT_NOD_ROOT (1 ESTs); MHRP-root (1 ESTs); MT_JCVI-MT3 (1 ESTs); MT_JCVI-MT2 (1 ESTs); MT_TRI (1 ESTs); MTUS_MIXTISSUE (1 ESTs); MT_SROOT_KV2 (1 ESTs); |
| Sequence |
CTTCAAAAAAACGATTCTTCCTCCTTTTGGCTTAGATTCTCTTCTCTTGGTTCCCAATTT
TCCAATCTGTATATTCTTCATTAAAAAAAATTCACCCTTTTTTCTGAATTATTTGCTTCT
TTTGAAGTAGAACGTTTGATTCTGACCCCAACTATTGAATTTTCTCAACTGGGTCTTGTT
GAATTTCTGTTGGGGTTGTGAATTCTACTTTTCTGAGTTGAAAAGTTTGTTCCTTTTCAT
TTTCTGGATTTGGGTCTGAATTATCACTTTTCAGGGTTTGTTTGGTTGCTTTGAAATTTT
CAAGGGTTGAAAAGTGAAAAAGTGAAAATGACAATTGGAAGTCTTGCACCTAAGACAGAG
AAGAAGAAATCATCGAGATCATCAAGGAAGAACAAGGCTGTTGTGAGTGAAAATGCACCT
TTGTTGCCTAAAAGTCAGGAAAGTGATTCAGGGTTTGATGATTTCAATGGAGCTTCATTT
TCCGGTGCCGTTTTCAACTTGGCGACTACGATTATTGGTGCTGGAATCATGGCTTTGCCT
GCAACTTTGAAACAGTTGGGGTTGATTCCTGGTCTTTGTGCTATCCTTTTAATGGCTTTT
TTGACTGAGAAGTCAATTGAGCTTTTGATTAGGTTTACAAGGGCAGGGAAAGCTGTTTCA
TATGCTGGTTTGATGGGTGATTCCTTTGGGAAATATGGAAAAGCTATGGCACAGATCTGT
GTTATTGTCAATAACATTGGTGTGCTGATTGTTTACATGATTATCATTGGTGATGTGCTT
TCTGGAACTTCTTCAAGTGGAGAACATCACTATGGTATTCTTGAAGGATGGTTTGGTGTG
CACTGGTGGACTGGGAGGACATTTGTTGTTCTGCTTACAACGGTTGCTATATTTACACCC
CTCGCAAGCTTTAAGCGAATTGATTCGTTGAGATTCACATCCGCCCTTTCCGTTGCCCTG
GCGGTTGTTTTTCTTGTCATTGCTGTGGGAATTTCTATTGTCAAAATTATAAGTGGAGGC
ATTACCATGCCGAGACTCTTCCCAGCTGTTACCGATGCAACATCAATTGTTAACCTATTC
ACTGTGGTTCCTGTGTTTGTGACTGCCTATATCTGTCACTACAATGTTCACAGCATAGAT
AATGAACTCGAGGACAACTCACAGATGCAAGGCGTTGTACGTACAGCCCTCGGTCTATGC
TCATCCGTGTATTTAATGATAAGCTTCTTTGGGTTCCTCCTATTTGGTGAAGGAACTCTT
GATGACGTACTTGCCAATTTCGATGCTGATCTTGGAATTCCTTTTGGTTCTTTGCTCAAC
GATGCTGTTCGTATTAGCTATGCTGCACACCTCATGCTTGTATTTCCAGTTGTGTTTTTC
CCATTGCGACTCAATATAGATGGTCTTCTCTTCCCTAAATCAAGACCTTTGGTTCTGGAT
AACTTCAGATTTGCATCAATGACTGTTTCCCTTATTGGTGTTATCTTCTTGGGAGCAAAT
TTCATACCTAGCATTTGGGATGCTTTCCAGTTCACTGGAGCAACCGCCGCGGTCTGTATA
GGATTCATCTTTCCAGCTGCCATCACTCTTAAGGATCGCTACAACATTGCGACTAAATCT
GACAAGATTTTATGCGTTGTTATGATAGTCCTAGCAGTCTTCTCAAACGTTGTCGCTATA
TATAGTGACGCCTATGCCTTGATCAAGCAGAACAAAACTTCACGCGAATGATGGTCACGG
TTCTTGAACAAAGGAACTGAATTGGTTGGGGTTAAATTGGTCGGTCAGAAAATCAGGGTT
TTCTGAGAGGGTCTCATGAGTCGTCAATTTTGAATAAACATAGAAGCAACCCTGTGTACA
AAATTGCTTCAAAAATTGTTGAGGCATGCAACGTGTATTCAGCCTCGTTTGTAATTTGCG
AATTCTGTTTTAGTTGTTATATGGTTTTTGTCGAGTAATACTCTCTTTCCCTGATTTGTT
CCTAAAAGATGTAATATAATTTTTGTTGGCATTTGTATGTATTTTATTGAGTGAAGGAAT
GAACTATGTAAGAATCTTATAGTTCTTGAATTGGACAAGAGTTAGTTACTATAGTTCCCC
CACCCTCCTTTCTATTTTTGAAAGTTTATGTGTGTTAAGTAAATTTGTTAGTTGTTGGTT
TTCTCATTTTCTGCAAGTAGTGTGGTGTATCTCACTCACATCTTAGTGTGATACATGTTC
ACTAGCTCAAGGTCCCACCTGGAGACATACGATTGATCGTCTATAATTGATCTTTGTAGC
CCTGTCATTTCAGATCGAAGACGTGTCTGGTTTCTGACACACGAGGTTATAATCAATCAA
TTTCATTTTGTCC
|
| EST members of Unigene |
CF069315 AL387373 AL383946 AL383160 AL381941 CX542077 CX541496 CX539307 CX539188 CX527264 CX526572 CX525855 CX525479 BE999809 BE998883 BG582093 BE124388 AW684188 BE239788 BI272259 BI271812 BI270530 BQ140648 BQ139101 BG454989 BG453258 BG452528 AW682907 AW257153 BE205349 BE204825 BG647975 BF004824 BF003656 BF003166 BF003165 BE203046 BE203407 AL367927 BE943145 BE941310 BG451814 BF635730 BF632192 BF641850 BF639645 BF639627 BF639252 BF639209 EY476126 GE347372 EX530604
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
2.A.1 Major facilitator superfamily MFS; 2.A.18 Amino acid/auxin transporter (aka permease) AAAP |
| Probeset |
Mtr.12363.1.S1_at
|
| Corresponding NCBI Gene |
833873
|
| Trichome-related Gene from Literature |
N/A
|