| Acc. |
TCMT55815 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Putative DNA repair protein RAD23-3 OS=Arabidopsis thaliana E-value=0; Putative DNA repair protein RAD23-4 OS=Arabidopsis thaliana E-value=0; Probable DNA repair protein RAD23 OS=Oryza sativa subsp. japonica E-value=3e-86; Putative DNA repair protein RAD23-2 OS=Arabidopsis thaliana E-value=2e-74; Putative DNA repair protein RAD23-1 OS=Arabidopsis thaliana E-value=3e-73; |
| Length |
1644 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_JAS_ROOR (4 ESTs); MtBA (4 ESTs); MT_VILEAF (3 ESTs); MT_HOGA (2 ESTs); MT_LEAF_PHOMA (2 ESTs); MT_TRI (2 ESTs); MT_IROOT_DSIR (2 ESTs); MT_DSTEM2 (2 ESTs); MT_ECELL (1 ESTs); MT_JCVI-MT1 (1 ESTs); MT_DSLC (1 ESTs); MT_NOD_ROOT (1 ESTs); MT_ROOTPHOS (1 ESTs); MT_MGHG (1 ESTs); MT_CDS (1 ESTs); MTAMP (1 ESTs); MT_INSECT (1 ESTs); MT_NOD_NOLLY (1 ESTs); MHRP-root (1 ESTs); MT_JCVI-MT3 (1 ESTs); MTUS_MIXTISSUE (1 ESTs); MtBC_GLOMUS (1 ESTs); MT_GPOD (1 ESTs); MT_SROOT_KV0 (1 ESTs); MT_PhoLEAF (1 ESTs); |
| Sequence |
AGCTATTGAACGTCTTGAAGCAATGGGTTGTTCCCTTCTCCGCCCTCCATAGGTTCATTT
ATCAGGCGAAGGAAGTCAGCCTGATGATCCCGAATCAATCTCAAAAGAAAGATTTTGTTG
CGCCTTTTCACTCTTTCTTTTATCCGTCGTCGTTTTGGTCTTCGAATCCCTAGTTTCGAA
TTTCGAAGCTATTCTTTGCGGCGATCGAAGATGAAGGTTTTCGTGAAAACTCTTAAAGGA
ACTCACTTCGAAATCGAAGTCACGCCTCAAGACACGATTTCTGCAGTGAAGAAAAATATA
GAAACCGTTCAAGGTGTAGATGTCTATCCTGCTGCACAGCAAATGCTTATTCATCAAGGG
AAAGTTTTGAAGGATGGTACCACCTTGGAGGAAAATAAAGTAGCTGAAAATAGTTTCATT
GTGATAATGCTTTCAAAGAGTAAGCCTGCGTCTGGTGAAGGGTCTACTACTTCAAATGCT
CCTCCAGCGAAGGCCCCACAGACGAGTGCTGCTCCTACTTCAACCCCCCCAGTGTCTGTT
TCACCTCAAGCTCCTGCTGCAACTGCGGCACCGCCTGCATCCGTTGCTGCACCTTCCCCA
GCTCCAGCTCCTGCTCCTATATCTTCGGCAACTGCTACGGAAGGTTCTGATGTCTATGGG
CAGGCTGCATCTAATCTGGTTGCCGGTAGCAACTTGGAGGGAACAGTTCAACAAATCCTA
GATATGGGAGGAGGAAGCTGGGATAGGGATACTGTAATTCGTGCTCTTCGAGCTGCCTTC
AATAACCCTGAGAGAGCGGTTGAATATTTGTATTCAGGTATACCTGAACAAGCTGAAGCT
CCAGCAGTGGCCCGAGTGCCTGCAAGTGCACAACCTGTGAATCCTGAGGCTGCAGCTGCA
GCTCCACAAGCAGCTCAGCCTGCTCCTGTTACCTCAAGTGGACCTAATGCCAATCCTCTA
GACCTCTTTCCCCAGGGCCTCCCAAATATTGGTGCTGGTGCTGCTGGTGCCGGCTCTCTG
GATTTTCTACGCAATAGTCAACAATTCCAAGCATTGCGAGCTATGGTGCAGGCAAATCCA
CAAATATTGCAGCCCATGCTACAGGAGCTTGGCAAACAAAATCCTCATCTTATGAGATTG
ATTCGGGATCATCAGGCTGACTTCCTTCGCCTGATAAATGAACCTATGGAGGGCGGAGAA
GGGAACAACCTATTGGGACAGATGGCTGCTGGCATGCCACAATCAGTAACTGTCACACCC
GAGGAGCGCCAAGCTATTGAACGTCTTGAAGCAATGGGTTTTGATCGTGCTATAGTATTG
GAGGTGTTCTTTGCTTGCAACAAAAATGAGGAATTGGCCGCCAACTACCTTTTAGACCAC
ATGCATGAGTTTGACGAACAATGATCTCCTTTCCAATAGTTTCCAAATTATTTTTCGTTA
TCTTTTCTCTCGGTGGACCTTTTAAATTTCTTATACTTGGTGTTAAATGAGGTAATGCTT
TATAATGACAATCTCTCTAGTTGACTGTGGACAAGGGATGTTTTTTACCTTCTCATTGCC
GCCCTTACAATGACCTTCTCATTTCCTCCCCATCGAGGGCTCGTTCTCACTATTCATATA
CATAGTCATTTGCTTTTCTGTATT
|
| EST members of Unigene |
BT050679 DY617974 CA920564 AL382576 AW560590 AW559560 AW696877 AW690471 BF645673 EV262189 BF005589 AW684699 AW329538 AJ503476 BG588991 BQ140665 BQ139760 BI309409 AI974530 BE323122 CX519643 CX519485 CX517308 CX530650 CX529417 CX528938 CX528929 BG647902 BG646301 AL371495 AL371494 AL367130 AL367129 BE942670 BG449614 EY474458 EX532480 ES612992
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Replication and Repair > ko03420 Nucleotide excision repair > K10839 UV excision repair protein RAD23 homolog B |
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Msa.1530.1.S1_at, Mtr.10540.1.S1_at
|
| Corresponding NCBI Gene |
821195
|
| Trichome-related Gene from Literature |
N/A
|