| Acc. |
TCMT40115 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
40S ribosomal protein S19-3 OS=Arabidopsis thaliana E-value=2e-66; 40S ribosomal protein S19-1 OS=Arabidopsis thaliana E-value=2e-66; 40S ribosomal protein S19-2 OS=Arabidopsis thaliana E-value=4e-65; 40S ribosomal protein S19 OS=Oryza sativa subsp. japonica E-value=5e-63; 40S ribosomal protein S19 OS=Mya arenaria E-value=2e-46; |
| Length |
871 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_DFLOWER (12 ESTs); MtBC_GLOMUS (9 ESTs); MT_GSEED (7 ESTs); MtBB_NOD (6 ESTs); MT_Drought (6 ESTs); MT_GESD (4 ESTs); MHRP-root (4 ESTs); MT_VILEAF (4 ESTs); MT_DLEAF (3 ESTs); MT_JCVI-MT3 (3 ESTs); MT_SIRRA (3 ESTs); MT_NOD_NOLLY (3 ESTs); MT_JAS_ROOR (2 ESTs); MT_HOGA (2 ESTs); MT_DROOT (2 ESTs); MT_MGHG (2 ESTs); MT_JCVI-MT1 (2 ESTs); MT_DSIL (2 ESTs); MT_FLOSEED_MTY (2 ESTs); MT_JCVI-MT2 (2 ESTs); MT_SROOT_KV0 (2 ESTs); MT_NOD_GVN (2 ESTs); MT_NOD_ROOT (2 ESTs); MTAMP (1 ESTs); MtRHE (1 ESTs); MtBA (1 ESTs); MT_IROOT_DSIR (1 ESTs); MT_ECELL (1 ESTs); MTPOSE (1 ESTs); MT_NOD_GVSN (1 ESTs); MT_CDS (1 ESTs); MT_ROOTPHOS (1 ESTs); |
| Sequence |
GGACCCTAATTCAGTTGTGCTTTGTGAGTAGAGGGAGAGAGAGAGAGAAGCTCGAGCAAG
CAAAGCAGCGGCACAACCATGGCTACCGCAAGGACTGTTCAAGATGTTTCTTCACACGAG
TTTGTCAAAGCTTACTCTGCTCATCTCAAAAGATCTGGCAAGATGGAGCTTCCAGAATGG
ACCGATATTGTGAAGACTGCAAGGTTTAAGGAGTTGGCACCTTATGATCCTGACTGGTAC
TATGTCAGAGCTGCTTCCATTGCAAGGAAGATCTACTTGAGGGGTGGACTCGGTGTTGGT
GCATTCCAGAGGATTTATGGTGGAAGTCAGAGGAATGGCAGTCGCCCACCTCATTTCTGC
AAGAGCAGTGGTTCCATTGCTCGCCACATTCTTCAACAGTTGCAGAACATGAACCTTATT
GAGATGGACACCAAGGGTGGCAGGAAGATCACTTCCAGTGGAAGGAGGGATTTGGACCAA
GTTGCTGGACGTATTGTTATTGCTCCTTGATCTGTAAACTGCTTCTAGGTTGAGTTTTGT
GTTTTGAGATATGTGATGATAACAAAGATAATGTGCAATTTTGATTTTAGTCATTGAGTG
GCTTATGTATTAGACTTGTTCAATGCTATGTTGCTTTTTAGTCTTTTAGTTTGTCTTATC
ACATTTTATTCACTGGATTTTTTTGGAATTTCACTCTTAAAATTCTTGTCTGTTAAGTTT
GCTTTACAAAATTATACCTATCTATCGTCTTGTAATGTTATAACTACACCACAGGTTCCC
CGTTACAACTAGCATTTGCATATTATCAAACATATGCCATTTGCTTATTATCAAGGATGC
CCTTAATGCAGTCATCTTAATTTCCTTCAAA
|
| EST members of Unigene |
BT051381 DY618049 DY616327 DY615771 AL389534 AL389533 AL387470 AL386000 AL385999 AL385015 AL385014 AL382257 AL381553 AL380751 AL380750 AL379535 AL375961 AL375960 AL375384 BE320330 BE320355 CX540202 CX539337 CX539209 CX538708 CX537422 CX536608 BI268523 AW559503 BF648897 EV259011 EV257337 DW015830 DW015457 BE998719 BG583423 AW574080 AW686428 AW684854 AW329059 AJ503170 CA990160 BI311796 BI311428 BI310457 BG589011 BG588742 BE240618 BE239680 BQ149013 BQ148886 BQ148363 BQ147893 BQ147514 BQ147185 BQ146934 BI272841 BI271655 BI271644 BI271055 BI270436 BG453967 BE317863 BF637286 BF521320 AW981210 AJ498247 BE203947 AW225588 BQ156424 BQ151701 BI269684 CX522303 CX521610 CX521447 CX518834 CX531967 CX531606 BG647413 BG646657 AA661036 AL373226 BE942866 BE941585 BG450174 BG450002 BF636366 BF634876 BF634131 BF633353 EY478575 EY475723 EY478014 GE351584 GE347148
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Translation > ko03010 Ribosome > K02966 small subunit ribosomal protein S19e |
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.42859.1.S1_at
|
| Corresponding NCBI Gene |
836238
|
| Trichome-related Gene from Literature |
N/A
|