Detail of EST/Unigene TCMT42360
Acc. TCMT42360
Internal Acc.
Type TC/Unigene
Annotation (Top 5 hits in Uniprot_trembl) Histidine decarboxylase OS=Solanum lycopersicum E-value=0; Histidine decarboxylase OS=Pseudomonas entomophila (strain L48) E-value=1e-76; Histidine decarboxylase OS=Pseudomonas fluorescens E-value=3e-75; Histidine decarboxylase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) E-value=4e-75; Histidine decarboxylase OS=Vibrio anguillarum (strain ATCC 68554 / 775) E-value=4e-75;
Length 1849 nt
Species Medicago truncatula
Belonged EST Libraries MT_JAS_ROOR (10 ESTs); MT_ECELL (7 ESTs); MT_DSTEM2 (6 ESTs); MT_SROOT_KV2 (6 ESTs); MtSNF (5 ESTs); MT_SEEDROOT_KV3 (4 ESTs); MT_Shoots (4 ESTs); MT_SROOT_KV0 (4 ESTs); MT_NOD_GVN (4 ESTs); MT_NOD_ROOT (3 ESTs); MT_SIRRA (3 ESTs); MtBC_GLOMUS (3 ESTs); MT_LEAF_PHOMA (3 ESTs); MT_VILEAF (2 ESTs); MtBB_NOD (2 ESTs); MT_DFLOWER (2 ESTs); MT_MGHG (2 ESTs); MT_INSECT (2 ESTs); MT_NOD_GVSN (2 ESTs); MT_JCVI-MT2 (2 ESTs); MT_PhoLEAF (2 ESTs); MTUS_MIXTISSUE (1 ESTs); MTAMP (1 ESTs); MTGIM (1 ESTs); MT_GSEED (1 ESTs); MT_HOGA (1 ESTs); MT_IROOT_DSIR (1 ESTs); MT_SROOT_KV1 (1 ESTs); MT_KVKC (1 ESTs); MT_DLEAF (1 ESTs); MT_JCVI-MT1 (1 ESTs); MT_CDS (1 ESTs); MT_JCVI-MT3 (1 ESTs); MT_NOD_NOLLY (1 ESTs);
Sequence GAAACCCTCTCTCTGATTGCCCCCATTTTCATTTCATTGTATCACTGTTTCCGCGTCTTT
TGCCACTGTTCTCTTCCAAATCTCATTCTTCTCTGTTCCTCTGTTGTGGATAACAAAATG
GTTGGAAGTGCTGATGTTTTGGTCAATGGTTTGAGCACTAATGGAGCAGTCGAACTATTG
CCTGATGATTTTGATGTGTCAGCCATCATCAAAGATCCAGTGCCTCCTGTAGTTGCTGCA
GACAACGGCATTGGCAAGGAGGAGGCAAAAATCAATGGAGGAAAAGAGAAAAGAGAAATA
GTTCTGGGAAGAAATATTCACACCACGTGTCTAGAAGTCACGGAGCCAGAAGCAGATGAT
GAAATTACCGGCGATCGTGATGCTCATATGGCAAGTGTGCTGGCCAGATACAGAAAATCC
TTAACTGAAAGGACAAAGTATCATTTAGGCTACCCCTACAATTTGGATTTCGATTATGGC
GCACTCTCTCAACTTCAGCACTTTTCCATAAACAACCTTGGAGATCCTTTCATTGAAAGC
AATTACGGTGTCCACTCCCGGCAGTTTGAAGTTGGTGTTCTGGATTGGTTTGCCAGATTG
TGGGAACTGGAGAAAAATGAGTACTGGGGGTATATAACAAACTGTGGCACAGAAGGCAAT
CTCCACGGCATCTTAGTTGGGAGAGAGGTATTACCAGATGGGATTTTGTATGCCTCACGA
GAGTCACATTATTCAATTTTTAAAGCTGCCCGTATGTACAGAATGGAATGTGAAAAGGTT
GAGACTCTTAATTCTGGCGAGATTGATTGTGATGATTTCAAGGCCAAACTTCTTCGCCAC
CAAGACAAACCAGCAATTATAAATGTGAACATAGGTACAACTGTGAAAGGAGCTGTGGAT
GATCTTGATCTGGTCATACAAAAACTTGAAGAAGCTGGGTTTTCACAGGACAGGTTCTAC
ATCCACGTTGATGGAGCTTTGTTTGGTCTCATGATGCCTTTTGTGAAACGAGCTCCAAAA
GTTACTTTTAAGAAGCCTATTGGCAGTGTCAGTGTTTCTGGCCACAAATTTGTGGGGTGC
CCAATGCCTTGTGGTGTGCAGATAACAAGATTGGAGCATATTAATGCTCTTTCCAGGAAT
GTGGAATACCTTGCTTCTAGGGATGCGACTATCATGGGTAGTCGAAATGGCCATGCTCCC
ATATTCCTTTGGTATACCTTGAACCGGAAAGGATACAGAGGCTTTCAGAAAGAAGTGCAG
AAATGCTTGCGGAATGCACACTACTTCAAAGACCGCCTTATCGAGGCTGGGATTGGTGCA
ATGCTTAATGAGCTTAGCAGCACGGTTGTATTTGAGCGACCACATGATGAAGAATTTATA
CGCAAGTGGCAGTTAGCATGCAAGGGGAACATCGCTCATGTGGTGGTGATGCCAAACGTC
ACTATTGAGAAGCTTGATGATTTTCTAAACGAGCTTGTGCAGAAGCGTGCTACCTGGTTT
GAAGATGGTACATTTCAACCGTATTGCATAGCATCAGATGTAGGTGAAAACAGTTGCCTA
TGTGCTCAGCATAAGTAATTGTAGCATCTAATAGAACCTAGAGTTTACAACGGTAGTTGT
TTGTTTCGAGTTTTTTATGTGGTGTGTTTTATCAGCACTGTGATGCACTTGTATAAGATT
TAGAATCGTCTTTGCTATCGTACTTACTTGGCCTTATATTGTTAGTACTTATAAATTTGG
TCAAATAGCCATTACTTGGCTTGTTATTGGTCATATATTGTTCAGTTTCCACAGCGAAAG
CTGCAATTACCAAGTTAGTTAAAAAAAACGGATGGATGAAAACTTGTGG
EST members of Unigene BT052530  DY617077  CA921584  AL389758  AL389757  AL384248  AL378801  AL378800  CX538947  AW268010  CX527199  CX526479  CX525797  CX525144  AW693237  AW696677  AW697378  AW693702  AW689502  AW688987  BG448445  BF650184  BF648018  BF645676  BF645243  BF644053  BF643873  EV261224  BE999251  BE998840  BG583873  BG583801  BG582386  BG581684  AW685849  AW685109  AW683951  AJ504358  AJ499385  CB892268  BG646117  AW736079  AI737487  BI272576  BI270727  BQ140898  BQ139086  BQ138567  BG453985  AJ845959  AJ845948  AJ845887  AJ845800  AJ845467  BM780161  BM779935  BM779685  BM779266  AW257129  AW256511  BE204606  BE204948  BE204163  AI737509  BG457755  BF638950  BQ156117  BQ154542  BQ153450  CX521960  CX519401  CX534364  CX533791  CX533699  CX532972  CX532758  CX532656  CX532438  CX531773  CX530582  CX529126  BG647291  BE203225  BQ164756  BE941719  BE941529  BI265115  BF639572  EY475652  GE350065  GE345074 
InterProScan Domain  
Gene Ontology  
KEGG Orthology Metabolism > Carbohydrate Metabolism > ko00650 Butanoate metabolism > K01580 glutamate decarboxylase;
Metabolism > Amino Acid Metabolism > ko00252 Alanine and aspartate metabolism > K01580 glutamate decarboxylase;
Metabolism > Amino Acid Metabolism > ko00251 Glutamate metabolism > K01580 glutamate decarboxylase;
Metabolism > Metabolism of Other Amino Acids > ko00410 beta-Alanine metabolism > K01580 glutamate decarboxylase;
Metabolism > Metabolism of Other Amino Acids > ko00430 Taurine and hypotaurine metabolism > K01580 glutamate decarboxylase;
Metabolism > Metabolism of Other Amino Acids > ko00430 Taurine and hypotaurine metabolism > K01594 sulfinoalanine decarboxylase
EC 4.1.1.15 
Transcription Factor Family
Transporter Classification Family
Probeset Mtr.22597.1.S1_s_at, Mtr.22599.1.S1_at
Corresponding NCBI Gene 840958 
Trichome-related Gene from Literature N/A